BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018A02LP1|AL427233
(696 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1471 1364 0.0
>3x_Contig1471
Length = 8032
Score = 1364 bits (688), Expect = 0.0
Identities = 695/696 (99%), Gaps = 1/696 (0%)
Strand = Plus / Minus
Query: 1 gatcataaaagcggaaaggaaaaaaaaaatgaaaaaatatcgagacgcgctaggtagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4211 gatcataaaagcggaaaggaaaaaaaaaatgaaaaaatatcgagacgcgctaggtagaat 4152
Query: 61 gaatgctaatgcatgtcgatattggaaacagcataactggttaagctcggctgcattttt 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4151 gaatgctaatgca-gtcgatattggaaacagcataactggttaagctcggctgcattttt 4093
Query: 121 gacggtcagaagtggccactggtataagtggggccagtggggtctgttatttcctcattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4092 gacggtcagaagtggccactggtataagtggggccagtggggtctgttatttcctcattc 4033
Query: 181 agataatcgcacactacgaacgttgctgctgtttcggacgccagactaggccaaacagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4032 agataatcgcacactacgaacgttgctgctgtttcggacgccagactaggccaaacagtg 3973
Query: 241 tagactgtcaattgaaaacaatcagaaatggtcgtcttaccgatttcttaggtactggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3972 tagactgtcaattgaaaacaatcagaaatggtcgtcttaccgatttcttaggtactggct 3913
Query: 301 ctaggaaatggagtgaatagcgcagttttgtgctttgtgcggtagacggaataaactgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3912 ctaggaaatggagtgaatagcgcagttttgtgctttgtgcggtagacggaataaactgta 3853
Query: 361 taggcaaccagtaaaaggatctacgagtgaactagtaagttacaaagtggaattgattgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3852 taggcaaccagtaaaaggatctacgagtgaactagtaagttacaaagtggaattgattgg 3793
Query: 421 cccattataaaggctgtgcaggagtccgaacatctcagaaaaccatttacaaaatgagct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3792 cccattataaaggctgtgcaggagtccgaacatctcagaaaaccatttacaaaatgagct 3733
Query: 481 gcctacctacatggttctttctttttattcacacaagttgcaccaatcgatgtgcttgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3732 gcctacctacatggttctttctttttattcacacaagttgcaccaatcgatgtgcttgtt 3673
Query: 541 tcgagtgagcaagtagctgattttcattttctttttttttttttggccttagggaaaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3672 tcgagtgagcaagtagctgattttcattttctttttttttttttggccttagggaaaact 3613
Query: 601 tactaggaacatgaaaaggtagttgttataatggattgtagtgggtaggtaggttgaggc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3612 tactaggaacatgaaaaggtagttgttataatggattgtagtgggtaggtaggttgaggc 3553
Query: 661 atttctggtacattccgtatattcgagtgtgctcgc 696
||||||||||||||||||||||||||||||||||||
Sbjct: 3552 atttctggtacattccgtatattcgagtgtgctcgc 3517
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,973
Number of Sequences: 1807
Number of extensions: 13973
Number of successful extensions: 448
Number of sequences better than 1.0e-20: 1
length of query: 696
length of database: 10,358,551
effective HSP length: 16
effective length of query: 680
effective length of database: 10,329,639
effective search space: 7024154520
effective search space used: 7024154520
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)